Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CCNT1O60563 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CCNT1O60563 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCNT1O60563 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNT1O60563 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CCNT1O60563 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 AC010203.1-204ENST00000548782 407 ntBASIC21.23■□□□□ 0.99
CCNT1O60563 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.23■□□□□ 0.99
CCNT1O60563 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCNT1O60563 AL499627.1-201ENST00000569373 2188 ntBASIC21.23■□□□□ 0.99
CCNT1O60563 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNT1O60563 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNT1O60563 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNT1O60563 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CCNT1O60563 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNT1O60563 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNT1O60563 WWOX-216ENST00000569818 525 ntBASIC21.22■□□□□ 0.99
CCNT1O60563 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNT1O60563 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNT1O60563 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNT1O60563 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNT1O60563 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNT1O60563 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
CCNT1O60563 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNT1O60563 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNT1O60563 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNT1O60563 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 AC113347.1-201ENST00000413321 391 ntBASIC21.21■□□□□ 0.99
CCNT1O60563 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 AL512604.3-201ENST00000569583 964 ntBASIC21.21■□□□□ 0.99
CCNT1O60563 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCNT1O60563 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCNT1O60563 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNT1O60563 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCNT1O60563 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCNT1O60563 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 LIN28AP1-201ENST00000429574 405 ntBASIC21.2■□□□□ 0.98
CCNT1O60563 AL137013.1-201ENST00000432946 1228 ntBASIC21.2■□□□□ 0.98
CCNT1O60563 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.2■□□□□ 0.98
CCNT1O60563 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms