Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 AL441883.1-201ENST00000566170 1045 ntBASIC17.96■□□□□ 0.47
PRICKLE3O43900 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 AL023973.1-201ENST00000624619 620 ntBASIC17.96■□□□□ 0.47
PRICKLE3O43900 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 AL031432.5-201ENST00000641059 760 ntBASIC17.96■□□□□ 0.47
PRICKLE3O43900 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRICKLE3O43900 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.96■□□□□ 0.47
PRICKLE3O43900 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 AP000523.1-201ENST00000398242 1049 ntBASIC17.95■□□□□ 0.46
PRICKLE3O43900 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
PRICKLE3O43900 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRICKLE3O43900 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 SEC1P-202ENST00000473944 940 ntBASIC17.94■□□□□ 0.46
PRICKLE3O43900 DUX4L26-201ENST00000489078 1255 ntBASIC17.94■□□□□ 0.46
PRICKLE3O43900 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 AC112497.1-201ENST00000624824 639 ntBASIC17.94■□□□□ 0.46
PRICKLE3O43900 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRICKLE3O43900 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRICKLE3O43900 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
PRICKLE3O43900 TNXA-203ENST00000507684 2038 ntBASIC17.93■□□□□ 0.46
PRICKLE3O43900 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PRICKLE3O43900 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRICKLE3O43900 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRICKLE3O43900 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRICKLE3O43900 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.93■□□□□ 0.46
PRICKLE3O43900 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms