Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCP110O43303 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCP110O43303 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.6■□□□□ 0.89
CCP110O43303 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.6■□□□□ 0.89
CCP110O43303 UNC93B5-201ENST00000530315 699 ntBASIC20.6■□□□□ 0.89
CCP110O43303 AC008687.6-201ENST00000596318 630 ntBASIC20.6■□□□□ 0.89
CCP110O43303 AC120498.8-201ENST00000614275 531 ntBASIC20.6■□□□□ 0.89
CCP110O43303 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.6■□□□□ 0.89
CCP110O43303 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.6■□□□□ 0.89
CCP110O43303 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.6■□□□□ 0.89
CCP110O43303 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCP110O43303 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCP110O43303 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CCP110O43303 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.6■□□□□ 0.89
CCP110O43303 ESPNP-201ENST00000270691 2015 ntBASIC20.6■□□□□ 0.89
CCP110O43303 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.59■□□□□ 0.89
CCP110O43303 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.59■□□□□ 0.89
CCP110O43303 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCP110O43303 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 GNAS-203ENST00000306120 1878 ntBASIC20.59■□□□□ 0.89
CCP110O43303 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCP110O43303 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCP110O43303 RNA5SP413-201ENST00000516373 109 ntBASIC20.59■□□□□ 0.89
CCP110O43303 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.59■□□□□ 0.89
CCP110O43303 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.59■□□□□ 0.89
CCP110O43303 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.59■□□□□ 0.89
CCP110O43303 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCP110O43303 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CCP110O43303 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCP110O43303 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.59■□□□□ 0.89
CCP110O43303 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.58■□□□□ 0.89
CCP110O43303 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCP110O43303 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.58■□□□□ 0.89
CCP110O43303 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.58■□□□□ 0.89
CCP110O43303 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCP110O43303 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.58■□□□□ 0.89
CCP110O43303 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.58■□□□□ 0.89
CCP110O43303 UNC93B4-201ENST00000505679 747 ntBASIC20.58■□□□□ 0.89
CCP110O43303 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.58■□□□□ 0.89
CCP110O43303 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCP110O43303 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.58■□□□□ 0.88
CCP110O43303 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CCP110O43303 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.58■□□□□ 0.88
CCP110O43303 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CCP110O43303 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CCP110O43303 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CCP110O43303 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.58■□□□□ 0.88
CCP110O43303 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCP110O43303 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.58■□□□□ 0.88
CCP110O43303 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCP110O43303 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.57■□□□□ 0.88
CCP110O43303 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.57■□□□□ 0.88
CCP110O43303 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCP110O43303 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.57■□□□□ 0.88
CCP110O43303 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 KRT18P6-201ENST00000555540 1265 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms