Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM24O15164 STARP1-201ENST00000397973 869 ntBASIC19.29■□□□□ 0.68
TRIM24O15164 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM24O15164 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM24O15164 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM24O15164 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM24O15164 AC024243.1-201ENST00000609234 778 ntBASIC19.29■□□□□ 0.68
TRIM24O15164 AC093458.2-201ENST00000623150 629 ntBASIC19.29■□□□□ 0.68
TRIM24O15164 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM24O15164 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM24O15164 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM24O15164 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM24O15164 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TRIM24O15164 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM24O15164 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM24O15164 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM24O15164 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM24O15164 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM24O15164 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM24O15164 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM24O15164 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM24O15164 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRIM24O15164 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 SPDYE13P-201ENST00000445314 798 ntBASIC19.28■□□□□ 0.68
TRIM24O15164 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM24O15164 AC092597.1-201ENST00000487352 616 ntBASIC19.28■□□□□ 0.68
TRIM24O15164 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM24O15164 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TRIM24O15164 AC116407.4-201ENST00000623319 1061 ntBASIC19.28■□□□□ 0.68
TRIM24O15164 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM24O15164 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM24O15164 AC004408.2-201ENST00000623613 2777 ntBASIC19.28■□□□□ 0.68
TRIM24O15164 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM24O15164 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM24O15164 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM24O15164 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM24O15164 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
TRIM24O15164 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRIM24O15164 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 LINC01311-201ENST00000565162 1445 ntBASIC19.27■□□□□ 0.68
TRIM24O15164 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRIM24O15164 VENTXP5-201ENST00000523979 775 ntBASIC19.27■□□□□ 0.68
TRIM24O15164 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TRIM24O15164 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM24O15164 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRIM24O15164 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM24O15164 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM24O15164 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TRIM24O15164 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM24O15164 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM24O15164 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
TRIM24O15164 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM24O15164 KRT8P3-201ENST00000519669 1449 ntBASIC19.26■□□□□ 0.67
TRIM24O15164 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM24O15164 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM24O15164 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.26■□□□□ 0.67
TRIM24O15164 ZNF444P1-201ENST00000559497 298 ntBASIC19.26■□□□□ 0.67
TRIM24O15164 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
TRIM24O15164 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM24O15164 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
TRIM24O15164 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM24O15164 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM24O15164 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms