Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP2A1O14983 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP2A1O14983 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 AC034236.2-201ENST00000606662 1610 ntBASIC21.44■■□□□ 1.02
ATP2A1O14983 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ATP2A1O14983 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
ATP2A1O14983 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.43■■□□□ 1.02
ATP2A1O14983 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ATP2A1O14983 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ATP2A1O14983 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2A1O14983 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP2A1O14983 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
ATP2A1O14983 AC068587.9-201ENST00000641814 219 ntBASIC21.43■■□□□ 1.02
ATP2A1O14983 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2A1O14983 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2A1O14983 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP2A1O14983 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.43■■□□□ 1.02
ATP2A1O14983 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP2A1O14983 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.42■■□□□ 1.02
ATP2A1O14983 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ATP2A1O14983 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.42■■□□□ 1.02
ATP2A1O14983 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.42■■□□□ 1.02
ATP2A1O14983 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ATP2A1O14983 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
ATP2A1O14983 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 AC092329.2-201ENST00000598402 547 ntBASIC21.42■■□□□ 1.02
ATP2A1O14983 AL121894.2-201ENST00000602977 491 ntBASIC21.42■■□□□ 1.02
ATP2A1O14983 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.42■■□□□ 1.02
ATP2A1O14983 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATP2A1O14983 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 PVRIG2P-201ENST00000435460 978 ntBASIC21.41■■□□□ 1.02
ATP2A1O14983 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.41■■□□□ 1.02
ATP2A1O14983 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.41■■□□□ 1.02
ATP2A1O14983 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATP2A1O14983 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.41■■□□□ 1.02
ATP2A1O14983 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
ATP2A1O14983 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP2A1O14983 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.4■■□□□ 1.02
ATP2A1O14983 AC006333.2-201ENST00000607957 2099 ntBASIC21.4■■□□□ 1.02
ATP2A1O14983 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP2A1O14983 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ATP2A1O14983 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.4■■□□□ 1.02
ATP2A1O14983 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP2A1O14983 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.4■■□□□ 1.02
ATP2A1O14983 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.4■■□□□ 1.02
ATP2A1O14983 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.4■■□□□ 1.02
ATP2A1O14983 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.4■■□□□ 1.02
ATP2A1O14983 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP2A1O14983 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP2A1O14983 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.4■■□□□ 1.02
ATP2A1O14983 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATP2A1O14983 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP2A1O14983 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP2A1O14983 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATP2A1O14983 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ATP2A1O14983 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
ATP2A1O14983 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP2A1O14983 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP2A1O14983 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP2A1O14983 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 CHCHD2P8-201ENST00000429873 447 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms