Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CASQ2O14958 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.8■□□□□ 0.44
CASQ2O14958 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.8■□□□□ 0.44
CASQ2O14958 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.8■□□□□ 0.44
CASQ2O14958 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CASQ2O14958 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 AC135776.1-201ENST00000319817 2481 ntBASIC17.8■□□□□ 0.44
CASQ2O14958 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.8■□□□□ 0.44
CASQ2O14958 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.8■□□□□ 0.44
CASQ2O14958 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CASQ2O14958 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CASQ2O14958 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
CASQ2O14958 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CASQ2O14958 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASQ2O14958 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.79■□□□□ 0.44
CASQ2O14958 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.79■□□□□ 0.44
CASQ2O14958 AC108860.2-201ENST00000562760 2183 ntBASIC17.79■□□□□ 0.44
CASQ2O14958 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CASQ2O14958 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.79■□□□□ 0.44
CASQ2O14958 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.79■□□□□ 0.44
CASQ2O14958 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.79■□□□□ 0.44
CASQ2O14958 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.79■□□□□ 0.44
CASQ2O14958 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.79■□□□□ 0.44
CASQ2O14958 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.79■□□□□ 0.44
CASQ2O14958 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CASQ2O14958 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASQ2O14958 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CASQ2O14958 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.78■□□□□ 0.44
CASQ2O14958 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.78■□□□□ 0.44
CASQ2O14958 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 AC138028.4-201ENST00000564984 1845 ntBASIC17.78■□□□□ 0.44
CASQ2O14958 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.78■□□□□ 0.44
CASQ2O14958 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.78■□□□□ 0.44
CASQ2O14958 MFSD11-216ENST00000590393 1141 ntBASIC17.78■□□□□ 0.44
CASQ2O14958 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CASQ2O14958 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.78■□□□□ 0.44
CASQ2O14958 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.78■□□□□ 0.44
CASQ2O14958 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASQ2O14958 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CASQ2O14958 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASQ2O14958 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CASQ2O14958 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CASQ2O14958 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CASQ2O14958 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.77■□□□□ 0.44
CASQ2O14958 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.77■□□□□ 0.44
CASQ2O14958 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.77■□□□□ 0.44
CASQ2O14958 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.77■□□□□ 0.44
CASQ2O14958 TFP1-202ENST00000475455 1573 ntBASIC17.77■□□□□ 0.44
CASQ2O14958 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASQ2O14958 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASQ2O14958 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms