Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EIF3FO00303 AC008556.1-201ENST00000610908 2040 ntBASIC18.32■□□□□ 0.52
EIF3FO00303 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EIF3FO00303 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
EIF3FO00303 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.31■□□□□ 0.52
EIF3FO00303 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EIF3FO00303 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
EIF3FO00303 MIR1238-201ENST00000408483 83 ntBASIC18.31■□□□□ 0.52
EIF3FO00303 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.31■□□□□ 0.52
EIF3FO00303 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.31■□□□□ 0.52
EIF3FO00303 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.31■□□□□ 0.52
EIF3FO00303 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.31■□□□□ 0.52
EIF3FO00303 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.31■□□□□ 0.52
EIF3FO00303 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.31■□□□□ 0.52
EIF3FO00303 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EIF3FO00303 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EIF3FO00303 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EIF3FO00303 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EIF3FO00303 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.3■□□□□ 0.52
EIF3FO00303 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
EIF3FO00303 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
EIF3FO00303 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
EIF3FO00303 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
EIF3FO00303 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.3■□□□□ 0.52
EIF3FO00303 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
EIF3FO00303 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.3■□□□□ 0.52
EIF3FO00303 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.3■□□□□ 0.52
EIF3FO00303 EGLN1P1-201ENST00000531623 762 ntBASIC18.3■□□□□ 0.52
EIF3FO00303 BX088651.1-201ENST00000540551 451 ntBASIC18.3■□□□□ 0.52
EIF3FO00303 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.3■□□□□ 0.52
EIF3FO00303 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.3■□□□□ 0.52
EIF3FO00303 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.3■□□□□ 0.52
EIF3FO00303 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.3■□□□□ 0.52
EIF3FO00303 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EIF3FO00303 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
EIF3FO00303 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 AC034236.2-201ENST00000606662 1610 ntBASIC18.3■□□□□ 0.52
EIF3FO00303 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EIF3FO00303 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.3■□□□□ 0.52
EIF3FO00303 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.3■□□□□ 0.52
EIF3FO00303 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.29■□□□□ 0.52
EIF3FO00303 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.29■□□□□ 0.52
EIF3FO00303 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.29■□□□□ 0.52
EIF3FO00303 AP003041.3-201ENST00000527151 707 ntBASIC18.29■□□□□ 0.52
EIF3FO00303 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 WWOX-216ENST00000569818 525 ntBASIC18.29■□□□□ 0.52
EIF3FO00303 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.29■□□□□ 0.52
EIF3FO00303 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 KRT8P7-201ENST00000533003 1432 ntBASIC18.29■□□□□ 0.52
EIF3FO00303 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EIF3FO00303 AC090164.3-201ENST00000610780 2143 ntBASIC18.29■□□□□ 0.52
EIF3FO00303 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
EIF3FO00303 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EIF3FO00303 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
EIF3FO00303 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms