Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 KRT18P13-201ENST00000400056 1290 ntBASIC18.32■□□□□ 0.52
TAF4O00268 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
TAF4O00268 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 AC079781.3-201ENST00000449110 356 ntBASIC18.32■□□□□ 0.52
TAF4O00268 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 AC092183.1-201ENST00000469884 875 ntBASIC18.32■□□□□ 0.52
TAF4O00268 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.32■□□□□ 0.52
TAF4O00268 AL158211.5-201ENST00000623583 2518 ntBASIC18.32■□□□□ 0.52
TAF4O00268 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TAF4O00268 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TAF4O00268 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TAF4O00268 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
TAF4O00268 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.31■□□□□ 0.52
TAF4O00268 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.31■□□□□ 0.52
TAF4O00268 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.31■□□□□ 0.52
TAF4O00268 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.31■□□□□ 0.52
TAF4O00268 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.31■□□□□ 0.52
TAF4O00268 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TAF4O00268 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.31■□□□□ 0.52
TAF4O00268 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TAF4O00268 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.31■□□□□ 0.52
TAF4O00268 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TAF4O00268 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.31■□□□□ 0.52
TAF4O00268 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.3■□□□□ 0.52
TAF4O00268 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TAF4O00268 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.3■□□□□ 0.52
TAF4O00268 AP003041.3-201ENST00000527151 707 ntBASIC18.3■□□□□ 0.52
TAF4O00268 GCSHP2-201ENST00000560971 527 ntBASIC18.3■□□□□ 0.52
TAF4O00268 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.3■□□□□ 0.52
TAF4O00268 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TAF4O00268 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TAF4O00268 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TAF4O00268 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 AC005082.1-201ENST00000413042 2259 ntBASIC18.3■□□□□ 0.52
TAF4O00268 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TAF4O00268 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.3■□□□□ 0.52
TAF4O00268 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TAF4O00268 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.3■□□□□ 0.52
TAF4O00268 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.29■□□□□ 0.52
TAF4O00268 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.29■□□□□ 0.52
TAF4O00268 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 SPDYE15P-201ENST00000424157 909 ntBASIC18.29■□□□□ 0.52
TAF4O00268 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.29■□□□□ 0.52
TAF4O00268 NUS1P1-201ENST00000446295 882 ntBASIC18.29■□□□□ 0.52
TAF4O00268 TSSC2-201ENST00000450217 709 ntBASIC18.29■□□□□ 0.52
TAF4O00268 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 AC079776.4-201ENST00000511039 504 ntBASIC18.29■□□□□ 0.52
TAF4O00268 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.29■□□□□ 0.52
TAF4O00268 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.29■□□□□ 0.52
TAF4O00268 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.29■□□□□ 0.52
TAF4O00268 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TAF4O00268 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.29■□□□□ 0.52
TAF4O00268 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TAF4O00268 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.29■□□□□ 0.52
TAF4O00268 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms