Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 Z82202.1-201ENST00000623446 1880 ntBASIC18.54■□□□□ 0.56
TLR4O00206 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TLR4O00206 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TLR4O00206 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.53■□□□□ 0.56
TLR4O00206 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.53■□□□□ 0.56
TLR4O00206 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TLR4O00206 SEC1P-202ENST00000473944 940 ntBASIC18.53■□□□□ 0.56
TLR4O00206 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.53■□□□□ 0.56
TLR4O00206 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.53■□□□□ 0.56
TLR4O00206 AC011498.5-201ENST00000592027 486 ntBASIC18.53■□□□□ 0.56
TLR4O00206 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.53■□□□□ 0.56
TLR4O00206 NPAP1P7-201ENST00000613027 823 ntBASIC18.53■□□□□ 0.56
TLR4O00206 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.53■□□□□ 0.56
TLR4O00206 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TLR4O00206 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TLR4O00206 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.52■□□□□ 0.56
TLR4O00206 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.52■□□□□ 0.56
TLR4O00206 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.52■□□□□ 0.56
TLR4O00206 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 AC092119.3-201ENST00000612618 583 ntBASIC18.52■□□□□ 0.56
TLR4O00206 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.52■□□□□ 0.56
TLR4O00206 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TLR4O00206 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.52■□□□□ 0.56
TLR4O00206 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.52■□□□□ 0.55
TLR4O00206 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
TLR4O00206 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TLR4O00206 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TLR4O00206 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TLR4O00206 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR4O00206 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 AC018445.3-201ENST00000624177 1945 ntBASIC18.51■□□□□ 0.55
TLR4O00206 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR4O00206 TPM4P1-201ENST00000436100 807 ntBASIC18.51■□□□□ 0.55
TLR4O00206 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.51■□□□□ 0.55
TLR4O00206 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.51■□□□□ 0.55
TLR4O00206 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR4O00206 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.51■□□□□ 0.55
TLR4O00206 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TLR4O00206 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR4O00206 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.5■□□□□ 0.55
TLR4O00206 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 AL020996.1-203ENST00000536896 2307 ntBASIC18.5■□□□□ 0.55
TLR4O00206 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.5■□□□□ 0.55
TLR4O00206 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms