Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC092597.1-201ENST00000487352 616 ntBASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC010240.3-201ENST00000607688 395 ntBASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SLC25A24-204ENST00000569674 2357 ntBASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC069148.1-201ENST00000608741 768 ntBASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.74■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AL645929.1-201ENST00000420084 975 ntBASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AL136038.4-201ENST00000603606 1261 ntBASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC093458.2-201ENST00000623150 629 ntBASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 HEIH-201ENST00000623091 1652 ntBASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC006333.2-201ENST00000607957 2099 ntBASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MIR3180-4-201ENST00000582223 153 ntBASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
C1QTNF3-AMACRE9PGA6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms