Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
C1QTNF9BB2RNN3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF9BB2RNN3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.57■□□□□ 0.4
C1QTNF9BB2RNN3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C1QTNF9BB2RNN3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
C1QTNF9BB2RNN3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 TREX1-205ENST00000625293 1783 ntBASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 RNA5SP415-201ENST00000517246 115 ntBASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 AC010240.3-201ENST00000607688 395 ntBASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 AC114341.1-201ENST00000618070 349 ntBASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C1QTNF9BB2RNN3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 MIR770-201ENST00000390219 98 ntBASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 RNA5SP416-201ENST00000516838 111 ntBASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 AC002347.1-201ENST00000569543 541 ntBASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C1QTNF9BB2RNN3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 AC023274.1-201ENST00000418278 595 ntBASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 SNHG9-202ENST00000564014 471 ntBASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 AP001269.4-201ENST00000609611 512 ntBASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF9BB2RNN3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 AL645939.2-201ENST00000427340 991 ntBASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 AC106028.4-201ENST00000614509 607 ntBASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF9BB2RNN3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms