Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 HEIH-201ENST00000623091 1652 ntBASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 NIFKP9-201ENST00000419265 221 ntBASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPSF4LA6NMK7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 HTR7P1-201ENST00000538670 1336 ntBASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 AC004980.1-204ENST00000429707 299 ntBASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 AP002982.1-201ENST00000492365 877 ntBASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 BICD1-207ENST00000551848 1962 ntBASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPSF4LA6NMK7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 RPS2P4-201ENST00000476944 856 ntBASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 C1QBPP2-201ENST00000528754 825 ntBASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
CPSF4LA6NMK7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms