Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 CCR12P-201ENST00000446203 998 ntBASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 C2orf69P3-201ENST00000565542 1120 ntBASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 AC010653.2-201ENST00000623505 997 ntBASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 AC116562.4-202ENST00000641738 218 ntBASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TCRBV5S1A1TA0A578 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.52■□□□□ 0.71
TCRBV5S1A1TA0A578 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
TCRBV5S1A1TA0A578 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.52■□□□□ 0.71
TCRBV5S1A1TA0A578 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.52■□□□□ 0.71
TCRBV5S1A1TA0A578 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 MMP23A-201ENST00000234610 1017 ntBASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 BX088651.1-201ENST00000540551 451 ntBASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 HOXB1-202ENST00000577092 1414 ntBASIC19.51■□□□□ 0.71
TCRBV5S1A1TA0A578 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 AL162741.1-201ENST00000565563 1558 ntBASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 AP000593.1-201ENST00000393668 712 ntBASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBV5S1A1TA0A578 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV5S1A1TA0A578 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms