Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 AC067852.2-201ENST00000590513 2313 ntBASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 AC135776.1-201ENST00000319817 2481 ntBASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 MESTP1-201ENST00000404287 994 ntBASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 AL031985.4-201ENST00000642138 673 ntBASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV7S3A2A0A539 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 B3GAT3P1-201ENST00000471720 806 ntBASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 AL359736.2-201ENST00000621992 437 ntBASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV7S3A2A0A539 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 AL353807.1-201ENST00000427475 662 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 FAM207BP-201ENST00000447172 505 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 RARRES2P10-201ENST00000564312 460 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 AC026271.3-201ENST00000571884 352 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 AC073195.1-201ENST00000607241 877 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 MIR6786-201ENST00000616843 113 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 AC008622.2-201ENST00000617006 1229 ntBASIC19.02■□□□□ 0.64
TCRBV7S3A2A0A539 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms