Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AC092118.2-201ENST00000613495 667 ntBASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 SIRPAP1-201ENST00000448467 1770 ntBASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV27A0A0K0K1C4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 KRT8P45-201ENST00000414328 1447 ntBASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 AC091874.3-201ENST00000512672 1195 ntBASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV27A0A0K0K1C4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 MIPEPP3-201ENST00000412105 444 ntBASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms