Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC113347.1-201ENST00000413321 391 ntBASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 KRT18P23-201ENST00000435622 1283 ntBASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC010203.1-204ENST00000548782 407 ntBASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 LINC01023-201ENST00000606054 436 ntBASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC073508.3-201ENST00000619697 1419 ntBASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC005363.2-201ENST00000618631 242 ntBASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC112497.1-201ENST00000624824 639 ntBASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC141257.4-201ENST00000634557 245 ntBASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC136944.6-201ENST00000634818 245 ntBASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV5-4A0A0C4DH59 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC005082.1-201ENST00000413042 2259 ntBASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV5-4A0A0C4DH59 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC104390.1-201ENST00000555663 520 ntBASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms