Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 AP002982.1-201ENST00000492365 877 ntBASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 CD99P1-205ENST00000527459 561 ntBASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 AC131212.4-201ENST00000623606 975 ntBASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV12-3A0A0B4J271 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 KRT8P41-201ENST00000533985 1514 ntBASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 AC128676.1-201ENST00000454392 318 ntBASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 C1QBPP2-201ENST00000528754 825 ntBASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 AC083906.6-201ENST00000641366 219 ntBASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV12-3A0A0B4J271 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AC009113.1-201ENST00000570267 2443 ntBASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AC133681.1-201ENST00000465482 601 ntBASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms