Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV5A0A0B4J249 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AC008764.6-201ENST00000595909 2069 ntBASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AC097658.1-201ENST00000475555 843 ntBASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 AL160286.2-201ENST00000567150 934 ntBASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV5A0A0B4J249 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SOX15-203ENST00000570788 1093 ntBASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 AL162741.1-201ENST00000565563 1558 ntBASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 HEIH-201ENST00000623091 1652 ntBASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV5A0A0B4J249 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms