Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 AC010536.3-201ENST00000620306 533 ntBASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 AC008556.1-201ENST00000610908 2040 ntBASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV1-1A0A0B4J248 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 PBX2P1-201ENST00000493219 1291 ntBASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 AC006116.8-202ENST00000587620 1550 ntBASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 CYP2T3P-201ENST00000601990 817 ntBASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 AC106739.1-201ENST00000617035 715 ntBASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 AL136967.2-201ENST00000623968 743 ntBASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 LINC00602-201ENST00000629776 2065 ntBASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV1-1A0A0B4J248 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 KRT8P45-201ENST00000414328 1447 ntBASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 AC004854.2-201ENST00000608450 1441 ntBASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 AC013268.1-206ENST00000638368 961 ntBASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 AC112229.1-201ENST00000639295 961 ntBASIC14.61□□□□□ -0.07
TRAV1-1A0A0B4J248 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms