Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC069544.1-201ENST00000609399 999 ntBASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC020916.1-201ENST00000587762 1774 ntBASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC018553.1-201ENST00000616682 1458 ntBASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TEX21P-204ENST00000641479 1693 ntBASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TSPY20P-201ENST00000450910 630 ntBASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ITM2C-210ENST00000620962 501 ntBASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AP000997.3-201ENST00000623333 2250 ntBASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AP006587.1-201ENST00000534129 1502 ntBASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC106820.2-201ENST00000563775 3264 ntBASIC13.28□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms