Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 AC006015.1-201ENST00000429970 570 ntBASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 TUBB8P6-201ENST00000436895 1288 ntBASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 KRT18P16-201ENST00000510337 1294 ntBASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 RAP2CP1-201ENST00000605103 478 ntBASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 AL121906.2-201ENST00000621597 723 ntBASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 TSPY21P-201ENST00000433481 731 ntBASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 AC139713.2-201ENST00000641328 2723 ntBASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV18A0A075B6X5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 AC134043.2-201ENST00000624206 2238 ntBASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 KRT18P5-201ENST00000436075 1291 ntBASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV18A0A075B6X5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 AC135776.1-201ENST00000319817 2481 ntBASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 LINC00896-202ENST00000609602 2128 ntBASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV18A0A075B6X5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms