Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
BIVM-ERCC5R4GMW8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 PENK-208ENST00000523051 772 ntTSL 5 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 GXYLT1P4-201ENST00000613576 1192 ntBASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 AL357033.4-201ENST00000617703 1807 ntBASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
BIVM-ERCC5R4GMW8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 VENTXP7-201ENST00000475503 772 ntBASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 AF238378.1-201ENST00000526806 358 ntBASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC31.2■■■□□ 2.59
BIVM-ERCC5R4GMW8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC009065.1-201ENST00000564055 1225 ntBASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC124864.1-201ENST00000623408 392 ntBASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
BIVM-ERCC5R4GMW8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 AL353692.3-201ENST00000407031 1396 ntBASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC31.19■■■□□ 2.58
BIVM-ERCC5R4GMW8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
BIVM-ERCC5R4GMW8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BIVM-ERCC5R4GMW8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC113404.2-201ENST00000507884 177 ntBASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 ABR-217ENST00000572441 563 ntTSL 4 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 AP000593.1-201ENST00000393668 712 ntBASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 GUSBP12-201ENST00000513727 720 ntBASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
BIVM-ERCC5R4GMW8 NFYC-AS1-201ENST00000606277 1687 ntBASIC31.15■■■□□ 2.58
BIVM-ERCC5R4GMW8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC31.15■■■□□ 2.58
BIVM-ERCC5R4GMW8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
BIVM-ERCC5R4GMW8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms