Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 AC110285.5-201ENST00000611501 352 ntBASIC17.74■□□□□ 0.43
GPC6Q9Y625 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC6Q9Y625 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC6Q9Y625 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 AC104581.1-202ENST00000635932 2618 ntBASIC17.73■□□□□ 0.43
GPC6Q9Y625 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 RPPH1-201ENST00000516869 333 ntBASIC17.73■□□□□ 0.43
GPC6Q9Y625 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GPC6Q9Y625 AL512353.2-201ENST00000448759 1962 ntBASIC17.73■□□□□ 0.43
GPC6Q9Y625 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC6Q9Y625 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 AL390961.4-201ENST00000623958 2535 ntBASIC17.72■□□□□ 0.43
GPC6Q9Y625 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 PRORSD1P-201ENST00000295112 541 ntBASIC17.72■□□□□ 0.43
GPC6Q9Y625 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 KRT16P5-201ENST00000455284 522 ntBASIC17.72■□□□□ 0.43
GPC6Q9Y625 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 C1QL1P1-201ENST00000568105 661 ntBASIC17.72■□□□□ 0.43
GPC6Q9Y625 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GPC6Q9Y625 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC6Q9Y625 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.71■□□□□ 0.43
GPC6Q9Y625 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC6Q9Y625 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms