Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB9Q9Y5E1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 AL450487.1-201ENST00000426799 995 ntBASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 AC008622.2-201ENST00000617006 1229 ntBASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 AC141257.4-201ENST00000634557 245 ntBASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 AC136944.6-201ENST00000634818 245 ntBASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB9Q9Y5E1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 HOMER2P1-201ENST00000455653 964 ntBASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 AP003041.3-201ENST00000527151 707 ntBASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB9Q9Y5E1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 AC011558.1-201ENST00000623459 338 ntBASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB9Q9Y5E1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB9Q9Y5E1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
PCDHB9Q9Y5E1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB9Q9Y5E1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB9Q9Y5E1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PCDHB9Q9Y5E1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDHB9Q9Y5E1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 HCG4P8-203ENST00000443049 980 ntBASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 FAM86EP-206ENST00000510506 987 ntBASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB9Q9Y5E1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms