Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 AC125437.2-201ENST00000625180 2167 ntBASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTDP1Q9Y5B0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 HCG4P8-203ENST00000443049 980 ntBASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 AC092597.1-201ENST00000487352 616 ntBASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 AL512353.2-201ENST00000448759 1962 ntBASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTDP1Q9Y5B0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 HBZP1-201ENST00000354915 429 ntBASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTDP1Q9Y5B0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 FEM1AP3-201ENST00000403722 1741 ntBASIC21.64■■□□□ 1.06
CTDP1Q9Y5B0 AC120498.9-201ENST00000339021 3867 ntBASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 AL645929.1-201ENST00000420084 975 ntBASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 KRT18P23-201ENST00000435622 1283 ntBASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.64■■□□□ 1.05
CTDP1Q9Y5B0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 AL109659.2-201ENST00000606809 1674 ntBASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.63■■□□□ 1.05
CTDP1Q9Y5B0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms