Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN1Q9UMX0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 AC112907.2-201ENST00000448639 330 ntBASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN1Q9UMX0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 RASA4DP-201ENST00000460726 1199 ntBASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.1■□□□□ 0.81
UBQLN1Q9UMX0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 AC006333.2-201ENST00000607957 2099 ntBASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 AC104390.1-201ENST00000555663 520 ntBASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 AL121956.5-201ENST00000625261 221 ntBASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 AL357033.4-201ENST00000617703 1807 ntBASIC20.09■□□□□ 0.81
UBQLN1Q9UMX0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 Z98044.1-201ENST00000632503 1764 ntBASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 MIR3917-201ENST00000580971 93 ntBASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN1Q9UMX0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms