Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AC005521.1-201ENST00000393351 872 ntBASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AP003041.3-201ENST00000527151 707 ntBASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AL138781.2-201ENST00000617896 1843 ntBASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AC007613.1-201ENST00000572811 2597 ntBASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT6Q9ULM6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 AC113347.1-201ENST00000413321 391 ntBASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 AC010203.1-204ENST00000548782 407 ntBASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNOT6Q9ULM6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 FP475955.4-201ENST00000623131 1990 ntBASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT6Q9ULM6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 TERF1P1-201ENST00000311003 1181 ntBASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 FAM210CP-201ENST00000445714 574 ntBASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT6Q9ULM6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 KRT8P3-201ENST00000519669 1449 ntBASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 HMGA1P5-201ENST00000412453 271 ntBASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 MIR4674-201ENST00000582457 87 ntBASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT6Q9ULM6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT6Q9ULM6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT6Q9ULM6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT6Q9ULM6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms