Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 TSPY23P-201ENST00000440136 739 ntBASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 AL160286.2-201ENST00000567150 934 ntBASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC083880.1-201ENST00000608266 535 ntBASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.93■□□□□ 0.46
NIPSNAP3AQ9UFN0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 ABALON-201ENST00000629058 1903 ntBASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 NCF1B-203ENST00000435988 1254 ntBASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC098934.4-201ENST00000564127 592 ntBASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPSNAP3AQ9UFN0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 PRKY-204ENST00000533551 1019 ntBASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC073592.3-201ENST00000625118 1834 ntBASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPSNAP3AQ9UFN0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.9■□□□□ 0.46
NIPSNAP3AQ9UFN0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms