Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC6Q9UBN7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 ZNF815P-204ENST00000434898 1737 ntBASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 AC083849.1-201ENST00000615227 514 ntBASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 HYMAI.1-201ENST00000620949 238 ntBASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HDAC6Q9UBN7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 STARP1-201ENST00000397973 869 ntBASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 VENTXP5-201ENST00000523979 775 ntBASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 AL136038.3-201ENST00000561909 1096 ntBASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC6Q9UBN7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.14■□□□□ 0.98
HDAC6Q9UBN7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.14■□□□□ 0.98
HDAC6Q9UBN7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
HDAC6Q9UBN7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC6Q9UBN7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HDAC6Q9UBN7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC6Q9UBN7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 TSPY23P-201ENST00000440136 739 ntBASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 CR769767.2-201ENST00000622735 460 ntBASIC21.14■□□□□ 0.97
HDAC6Q9UBN7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms