Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 AC084018.2-201ENST00000613093 2607 ntBASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 AC124067.4-201ENST00000519691 2379 ntBASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 C2orf69P4-201ENST00000565394 541 ntBASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD3Q9UBI1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 SUDS3P1-201ENST00000505831 966 ntBASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 AC080080.1-201ENST00000625121 2420 ntBASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD3Q9UBI1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 AC007322.4-201ENST00000509611 723 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms