Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 TEX21P-204ENST00000641479 1693 ntBASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 C2orf69P3-201ENST00000565542 1120 ntBASIC16.19■□□□□ 0.18
TREM2Q9NZC2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TREM2Q9NZC2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.18■□□□□ 0.18
TREM2Q9NZC2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 KRT18P57-201ENST00000443599 1254 ntBASIC16.18■□□□□ 0.18
TREM2Q9NZC2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 DGCR10-201ENST00000609839 495 ntBASIC16.18■□□□□ 0.18
TREM2Q9NZC2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.18■□□□□ 0.18
TREM2Q9NZC2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 INGX-201ENST00000359239 846 ntBASIC16.17■□□□□ 0.18
TREM2Q9NZC2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AL137013.1-201ENST00000432946 1228 ntBASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AC092865.7-201ENST00000641832 219 ntBASIC16.17■□□□□ 0.18
TREM2Q9NZC2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 KRT8P11-201ENST00000409686 1436 ntBASIC16.17■□□□□ 0.18
TREM2Q9NZC2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 AL161938.1-201ENST00000569833 2180 ntBASIC16.17■□□□□ 0.18
TREM2Q9NZC2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
TREM2Q9NZC2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TREM2Q9NZC2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.16■□□□□ 0.18
TREM2Q9NZC2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TREM2Q9NZC2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TREM2Q9NZC2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.16■□□□□ 0.18
TREM2Q9NZC2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TREM2Q9NZC2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms