Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
BLOC1S4Q9NUP1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.84■□□□□ 0.93
BLOC1S4Q9NUP1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 ECEL1P2-202ENST00000465689 757 ntBASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 WWOX-216ENST00000569818 525 ntBASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
BLOC1S4Q9NUP1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.83■□□□□ 0.92
BLOC1S4Q9NUP1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 RNF165-205ENST00000588679 2904 ntBASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
BLOC1S4Q9NUP1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 AC073592.3-201ENST00000625118 1834 ntBASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms