Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 AL671277.2-201ENST00000458060 996 ntBASIC19.35■□□□□ 0.69
VPS45Q9NRW7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 AP000974.1-201ENST00000623909 2387 ntBASIC19.35■□□□□ 0.69
VPS45Q9NRW7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VPS45Q9NRW7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 TSPY17P-201ENST00000450329 467 ntBASIC19.34■□□□□ 0.69
VPS45Q9NRW7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 CLEC4GP1-201ENST00000596555 870 ntBASIC19.34■□□□□ 0.69
VPS45Q9NRW7 AC140113.3-201ENST00000605663 199 ntBASIC19.34■□□□□ 0.69
VPS45Q9NRW7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.34■□□□□ 0.69
VPS45Q9NRW7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 AC092338.2-201ENST00000568827 1415 ntBASIC19.34■□□□□ 0.69
VPS45Q9NRW7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS45Q9NRW7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS45Q9NRW7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 AC008040.2-201ENST00000461049 708 ntBASIC19.33■□□□□ 0.68
VPS45Q9NRW7 PRSS44-201ENST00000515154 1146 ntBASIC19.33■□□□□ 0.68
VPS45Q9NRW7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS45Q9NRW7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS45Q9NRW7 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms