Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLK4Q9HAZ1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 Z85996.1-201ENST00000494644 937 ntBASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 DGCR10-201ENST00000609839 495 ntBASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 AC130371.2-201ENST00000619443 611 ntBASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLK4Q9HAZ1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 HCG11-201ENST00000411553 5696 ntBASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 AC004951.3-201ENST00000418645 1148 ntBASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 SNORA78-201ENST00000459373 127 ntBASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 MIR6786-201ENST00000616843 113 ntBASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLK4Q9HAZ1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLK4Q9HAZ1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms