Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.93■□□□□ 0.46
BRF2Q9HAW0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 BICD1-207ENST00000551848 1962 ntBASIC17.93■□□□□ 0.46
BRF2Q9HAW0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRF2Q9HAW0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 KRT18P41-201ENST00000518924 1277 ntBASIC17.92■□□□□ 0.46
BRF2Q9HAW0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 AC026471.5-201ENST00000615068 467 ntBASIC17.92■□□□□ 0.46
BRF2Q9HAW0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRF2Q9HAW0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.91■□□□□ 0.46
BRF2Q9HAW0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 MIR718-201ENST00000390190 70 ntBASIC17.91■□□□□ 0.46
BRF2Q9HAW0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 Z99916.2-201ENST00000604037 246 ntBASIC17.91■□□□□ 0.46
BRF2Q9HAW0 AC008622.2-201ENST00000617006 1229 ntBASIC17.91■□□□□ 0.46
BRF2Q9HAW0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 AL499627.1-201ENST00000569373 2188 ntBASIC17.91■□□□□ 0.46
BRF2Q9HAW0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRF2Q9HAW0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 308.4 ms