Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRRC40Q9H9A6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRC40Q9H9A6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 AC138932.1-201ENST00000534164 6830 ntBASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 AL355355.2-201ENST00000442321 338 ntBASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 RCC2P3-201ENST00000418112 1537 ntBASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC40Q9H9A6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 Z99916.2-201ENST00000604037 246 ntBASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 AC026471.5-201ENST00000615068 467 ntBASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 REXO1L12P-201ENST00000622156 912 ntBASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC40Q9H9A6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC40Q9H9A6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRC40Q9H9A6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC40Q9H9A6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms