Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SOX15-203ENST00000570788 1093 ntBASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 AC008687.6-201ENST00000596318 630 ntBASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.58■□□□□ 0.24
COMMD4Q9H0A8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 AL162741.1-201ENST00000565563 1558 ntBASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 MYC-209ENST00000641252 345 ntBASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 AL133373.2-201ENST00000623187 2828 ntBASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD4Q9H0A8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 TSPY23P-201ENST00000440136 739 ntBASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD4Q9H0A8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 AC126763.1-201ENST00000552015 2118 ntBASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms