Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 AC026185.1-201ENST00000445748 174 ntBASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 F2R-202ENST00000505600 442 ntTSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 Six3os1_6.1-201ENST00000620790 196 ntBASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 GNAS-203ENST00000306120 1878 ntBASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
KRTAP3-1Q9BYR8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 AL357033.4-201ENST00000617703 1807 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 AL691447.1-201ENST00000419456 387 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 PPP1R14BP2-201ENST00000426284 444 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC25A6P5-201ENST00000435663 894 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 OR2A1-AS1-207ENST00000486094 819 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 AC060766.5-201ENST00000590539 871 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 IKBKGP1-201ENST00000612193 1073 ntBASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
KRTAP3-1Q9BYR8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
KRTAP3-1Q9BYR8 AC008556.1-201ENST00000610908 2040 ntBASIC9.49□□□□□ -0.89
KRTAP3-1Q9BYR8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
KRTAP3-1Q9BYR8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
KRTAP3-1Q9BYR8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC9.49□□□□□ -0.89
KRTAP3-1Q9BYR8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms