Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC093484.2-201ENST00000580996 2166 ntBASIC11.17□□□□□ -0.62
LIMD2Q9BT23 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LIMD2Q9BT23 AC141586.5-201ENST00000624546 2050 ntBASIC11.16□□□□□ -0.62
LIMD2Q9BT23 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 AC005332.7-201ENST00000614046 2005 ntBASIC11.16□□□□□ -0.62
LIMD2Q9BT23 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 RHOD-202ENST00000532559 538 ntTSL 3 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms