Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 AL160286.2-201ENST00000567150 934 ntBASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 AC011484.1-201ENST00000377652 1995 ntBASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNTNAP3BQ96NU0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 NSUN5P1-202ENST00000421140 1535 ntBASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 NSUN5P2-203ENST00000457352 1529 ntBASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 HLA-V-201ENST00000429037 534 ntBASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 SNHG9-202ENST00000564014 471 ntBASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTNAP3BQ96NU0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 AL391807.1-203ENST00000604392 2365 ntBASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 AC034105.1-201ENST00000563488 319 ntBASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 AL157384.1-201ENST00000445995 2473 ntBASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTNAP3BQ96NU0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 HNRNPDP1-201ENST00000439535 754 ntBASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.86■□□□□ 0.45
CNTNAP3BQ96NU0 AC008608.2-201ENST00000606089 416 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms