Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 AC012306.2-201ENST00000609350 630 ntBASIC21.8■■□□□ 1.08
PGBD1Q96JS3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PGBD1Q96JS3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 LINC01568-207ENST00000641790 1380 ntBASIC21.79■■□□□ 1.08
PGBD1Q96JS3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 AL390961.4-201ENST00000623958 2535 ntBASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.79■■□□□ 1.08
PGBD1Q96JS3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.78■■□□□ 1.08
PGBD1Q96JS3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PGBD1Q96JS3 BICD1-207ENST00000551848 1962 ntBASIC21.78■■□□□ 1.08
PGBD1Q96JS3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 LINC01023-201ENST00000606054 436 ntBASIC21.77■■□□□ 1.08
PGBD1Q96JS3 AC097493.4-201ENST00000641197 219 ntBASIC21.77■■□□□ 1.08
PGBD1Q96JS3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PGBD1Q96JS3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PGBD1Q96JS3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PGBD1Q96JS3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PGBD1Q96JS3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.77■■□□□ 1.07
PGBD1Q96JS3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
PGBD1Q96JS3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
PGBD1Q96JS3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms