Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 AL445228.2-201ENST00000605589 952 ntBASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 KRT18P23-201ENST00000435622 1283 ntBASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 HOXB1-202ENST00000577092 1414 ntBASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 NTF6B-201ENST00000591913 560 ntBASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 AC024243.1-201ENST00000609234 778 ntBASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD1Q96GM5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 AL357033.4-201ENST00000617703 1807 ntBASIC19.71■□□□□ 0.75
SMARCD1Q96GM5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 Z98044.1-201ENST00000632503 1764 ntBASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 AL359075.1-203ENST00000462729 1002 ntBASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 SEC1P-202ENST00000473944 940 ntBASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SMARCD1Q96GM5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms