Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 UNC93B5-201ENST00000530315 699 ntBASIC16.29■□□□□ 0.2
CPNE2Q96FN4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPNE2Q96FN4 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.29■□□□□ 0.2
CPNE2Q96FN4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 AC098934.4-201ENST00000564127 592 ntBASIC16.28■□□□□ 0.2
CPNE2Q96FN4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE2Q96FN4 ANO7L1-203ENST00000602586 1720 ntBASIC16.28■□□□□ 0.2
CPNE2Q96FN4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 AC012313.1-201ENST00000593393 3059 ntBASIC16.27■□□□□ 0.2
CPNE2Q96FN4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE2Q96FN4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms