Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 KRT18P29-201ENST00000397031 1267 ntBASIC16.84■□□□□ 0.29
PTP4A1Q93096 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 AC233263.1-201ENST00000578059 224 ntBASIC16.84■□□□□ 0.29
PTP4A1Q93096 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 ITM2C-210ENST00000620962 501 ntBASIC16.84■□□□□ 0.29
PTP4A1Q93096 AL023875.1-201ENST00000640777 796 ntBASIC16.84■□□□□ 0.29
PTP4A1Q93096 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 AL162741.1-201ENST00000565563 1558 ntBASIC16.84■□□□□ 0.29
PTP4A1Q93096 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTP4A1Q93096 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.84■□□□□ 0.29
PTP4A1Q93096 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PTP4A1Q93096 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PTP4A1Q93096 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PTP4A1Q93096 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTP4A1Q93096 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.83■□□□□ 0.29
PTP4A1Q93096 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTP4A1Q93096 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.83■□□□□ 0.28
PTP4A1Q93096 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTP4A1Q93096 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTP4A1Q93096 AC067852.2-201ENST00000590513 2313 ntBASIC16.82■□□□□ 0.28
PTP4A1Q93096 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 KRT8P32-201ENST00000512863 1461 ntBASIC16.82■□□□□ 0.28
PTP4A1Q93096 KRT8P11-201ENST00000409686 1436 ntBASIC16.82■□□□□ 0.28
PTP4A1Q93096 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 AC239809.2-201ENST00000415381 517 ntBASIC16.82■□□□□ 0.28
PTP4A1Q93096 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.82■□□□□ 0.28
PTP4A1Q93096 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTP4A1Q93096 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms