Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 PCDHB18P-201ENST00000524813 2368 ntBASIC19.19■□□□□ 0.66
SCG3Q8WXD2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 NAPSB-206ENST00000562112 1266 ntBASIC19.19■□□□□ 0.66
SCG3Q8WXD2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 AC079598.2-202ENST00000546624 1451 ntBASIC19.19■□□□□ 0.66
SCG3Q8WXD2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 AC018470.1-201ENST00000624790 3129 ntBASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCG3Q8WXD2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 TEX21P-204ENST00000641479 1693 ntBASIC19.18■□□□□ 0.66
SCG3Q8WXD2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.18■□□□□ 0.66
SCG3Q8WXD2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 AC145285.6-201ENST00000604632 637 ntBASIC19.18■□□□□ 0.66
SCG3Q8WXD2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCG3Q8WXD2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 FITM1-202ENST00000559294 800 ntBASIC19.17■□□□□ 0.66
SCG3Q8WXD2 AC010331.1-201ENST00000611423 582 ntBASIC19.17■□□□□ 0.66
SCG3Q8WXD2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.17■□□□□ 0.66
SCG3Q8WXD2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms