Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM3Q8TF72 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 AC145285.6-201ENST00000604632 637 ntBASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 TPM4P1-201ENST00000436100 807 ntBASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.1■□□□□ 0.65
SHROOM3Q8TF72 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 AL353719.1-201ENST00000566847 864 ntBASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 AC099343.3-201ENST00000605834 2503 ntBASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHROOM3Q8TF72 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 KRT8P32-201ENST00000512863 1461 ntBASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 LINC01568-207ENST00000641790 1380 ntBASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 AC008556.1-201ENST00000610908 2040 ntBASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 AP000593.1-201ENST00000393668 712 ntBASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 CR769767.2-201ENST00000622735 460 ntBASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM3Q8TF72 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 HMGA1P5-201ENST00000412453 271 ntBASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 SLC25A3P1-201ENST00000443844 931 ntBASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM3Q8TF72 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms