Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3IL1Q8TBN0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 AC008764.6-201ENST00000595909 2069 ntBASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 AC126763.1-201ENST00000552015 2118 ntBASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 AC124283.5-201ENST00000624661 1809 ntBASIC18.7■□□□□ 0.58
RAB3IL1Q8TBN0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 TUBB8P6-201ENST00000436895 1288 ntBASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 AC080038.1-201ENST00000611274 1154 ntBASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3IL1Q8TBN0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3IL1Q8TBN0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms