Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 AL390719.2-201ENST00000606993 987 ntBASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 IGHV3-41-201ENST00000613121 348 ntBASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 AL773604.1-201ENST00000617417 272 ntBASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.65■□□□□ 0.42
SNIP1Q8TAD8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNIP1Q8TAD8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 IGHV3-47-201ENST00000425060 335 ntBASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 AC005332.3-201ENST00000589904 676 ntBASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SNIP1Q8TAD8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 AC092865.5-201ENST00000545435 363 ntBASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.63■□□□□ 0.41
SNIP1Q8TAD8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 AP003733.1-201ENST00000491725 852 ntBASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 SLC25A1P1-201ENST00000528351 927 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms