Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 RCC2P3-201ENST00000418112 1537 ntBASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 AL031133.1-201ENST00000406807 723 ntBASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 AC024243.1-201ENST00000609234 778 ntBASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 AL358472.4-201ENST00000633140 710 ntBASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 MYC-208ENST00000641036 567 ntBASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNEP1R1Q8N9A8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.64■□□□□ 0.26
CNEP1R1Q8N9A8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.64■□□□□ 0.26
CNEP1R1Q8N9A8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CNEP1R1Q8N9A8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.64■□□□□ 0.26
CNEP1R1Q8N9A8 FP475955.4-201ENST00000623131 1990 ntBASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 AL512353.2-201ENST00000448759 1962 ntBASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNEP1R1Q8N9A8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 AC112907.2-201ENST00000448639 330 ntBASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 KRT18P38-201ENST00000449496 1282 ntBASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 AC091076.1-201ENST00000610741 619 ntBASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNEP1R1Q8N9A8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms