Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 KRT8P41-201ENST00000533985 1514 ntBASIC19.47■□□□□ 0.71
CCDC89Q8N998 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 KRT16P5-201ENST00000455284 522 ntBASIC19.47■□□□□ 0.71
CCDC89Q8N998 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC89Q8N998 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC89Q8N998 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC89Q8N998 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC89Q8N998 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 ABALON-201ENST00000629058 1903 ntBASIC19.45■□□□□ 0.7
CCDC89Q8N998 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.45■□□□□ 0.7
CCDC89Q8N998 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC89Q8N998 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC89Q8N998 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms